Distance-based detection of out-of-distribution silent failures for Covid-19 lung lesion segmentation

Med Image Anal. 2022 Nov:82:102596. doi: 10.1016/j.media.2022.102596. Epub 2022 Aug 24.

Abstract

Automatic segmentation of ground glass opacities and consolidations in chest computer tomography (CT) scans can potentially ease the burden of radiologists during times of high resource utilisation. However, deep learning models are not trusted in the clinical routine due to failing silently on out-of-distribution (OOD) data. We propose a lightweight OOD detection method that leverages the Mahalanobis distance in the feature space and seamlessly integrates into state-of-the-art segmentation pipelines. The simple approach can even augment pre-trained models with clinically relevant uncertainty quantification. We validate our method across four chest CT distribution shifts and two magnetic resonance imaging applications, namely segmentation of the hippocampus and the prostate. Our results show that the proposed method effectively detects far- and near-OOD samples across all explored scenarios.

Keywords: Distribution shift; Out-of-distribution detection; Uncertainty estimation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • COVID-19*
  • Humans
  • Lung / diagnostic imaging
  • Lung Diseases*
  • Magnetic Resonance Imaging
  • Male
  • Tomography, X-Ray Computed / methods