Structural basis for Gemin5 decamer-mediated mRNA binding

Nat Commun. 2022 Sep 2;13(1):5166. doi: 10.1038/s41467-022-32883-z.

Abstract

Gemin5 in the Survival Motor Neuron (SMN) complex serves as the RNA-binding protein to deliver small nuclear RNAs (snRNAs) to the small nuclear ribonucleoprotein Sm complex via its N-terminal WD40 domain. Additionally, the C-terminal region plays an important role in regulating RNA translation by directly binding to viral RNAs and cellular mRNAs. Here, we present the three-dimensional structure of the Gemin5 C-terminal region, which adopts a homodecamer architecture comprised of a dimer of pentamers. By structural analysis, mutagenesis, and RNA-binding assays, we find that the intact pentamer/decamer is critical for the Gemin5 C-terminal region to bind cognate RNA ligands and to regulate mRNA translation. The Gemin5 high-order architecture is assembled via pentamerization, allowing binding to RNA ligands in a coordinated manner. We propose a model depicting the regulatory role of Gemin5 in selective RNA binding and translation. Therefore, our work provides insights into the SMN complex-independent function of Gemin5.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ligands
  • Protein Binding
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Nuclear* / metabolism
  • Ribonucleoproteins, Small Nuclear* / metabolism
  • SMN Complex Proteins / metabolism

Substances

  • Ligands
  • RNA, Messenger
  • RNA, Small Nuclear
  • Ribonucleoproteins, Small Nuclear
  • SMN Complex Proteins