PrkA is an ATP-dependent protease that regulates sporulation in Bacillus subtilis

J Biol Chem. 2022 Oct;298(10):102436. doi: 10.1016/j.jbc.2022.102436. Epub 2022 Aug 28.

Abstract

In Bacillus subtilis, sporulation is a sequential and highly regulated process. Phosphorylation events by histidine kinases are key points in the phosphorelay that initiates sporulation, but serine/threonine protein kinases also play important auxiliary roles in this regulation. PrkA has been proposed to be a serine protein kinase expressed during the initiation of sporulation and involved in this differentiation process. Additionally, the role of PrkA in sporulation has been previously proposed to be mediated via the transition phase regulator ScoC, which in turn regulates the transcriptional factor σK and its regulon. However, the kinase activity of PrkA has not been clearly demonstrated, and neither its autophosphorylation nor phosphorylated substrates have been unambiguously established in B. subtilis. We demonstrated here that PrkA regulation of ScoC is likely indirect. Following bioinformatic homology searches, we revealed sequence similarities of PrkA with the ATPases associated with diverse cellular activities ATP-dependent Lon protease family. Here, we showed that PrkA is indeed able to hydrolyze α-casein, an exogenous substrate of Lon proteases, in an ATP-dependent manner. We also showed that this ATP-dependent protease activity is essential for PrkA function in sporulation since mutation in the Walker A motif leads to a sporulation defect. Furthermore, we found that PrkA protease activity is tightly regulated by phosphorylation events involving one of the Ser/Thr protein kinases of B. subtilis, PrkC. Taken together, our results clarify the key role of PrkA in the complex process of B. subtilis sporulation.

Keywords: ATPase; Bacillus subtilis; Lon protease; PrkA; phosphorylation; sporulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP-Dependent Proteases* / genetics
  • ATP-Dependent Proteases* / metabolism
  • Bacillus subtilis* / genetics
  • Bacillus subtilis* / physiology
  • Bacterial Proteins* / genetics
  • Bacterial Proteins* / metabolism
  • Gene Expression Regulation, Bacterial
  • Protein Serine-Threonine Kinases / genetics
  • Spores, Bacterial* / genetics
  • Spores, Bacterial* / physiology

Substances

  • ATP-Dependent Proteases
  • Bacterial Proteins
  • Protein Serine-Threonine Kinases
  • PrkA protein, Bacillus subtilis