Identification of the Biosynthetic Gene Cluster for Pyracrimycin A, an Antibiotic Produced by Streptomyces sp

ACS Chem Biol. 2022 Sep 16;17(9):2411-2417. doi: 10.1021/acschembio.2c00480. Epub 2022 Aug 30.

Abstract

Actinomycetes make a wealth of complex, structurally diverse natural products, and a key challenge is to link them to their biosynthetic gene clusters and delineate the reactions catalyzed by each of the enzymes. Here, we report the biosynthetic gene cluster for pyracrimycin A, a set of nine genes that includes a core nonribosomal peptide synthase (pymB) that utilizes serine and proline as precursors and a monooxygenase (pymC) that catalyzes Baeyer-Villiger oxidation. The cluster is similar to the one for brabantamide A; however, pyracrimycin A biosynthesis differs in that feeding experiments with isotope-labeled serine and proline suggest that a ring opening reaction takes place and a carbon is lost from serine downstream of the oxidation reaction. Based on these data, we propose a full biosynthesis pathway for pyracrimycin A.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / metabolism
  • Biological Products* / metabolism
  • Carbon / metabolism
  • Mixed Function Oxygenases / metabolism
  • Multigene Family
  • Proline / metabolism
  • Pyrroles
  • Serine / metabolism
  • Streptomyces* / metabolism

Substances

  • Anti-Bacterial Agents
  • Biological Products
  • Pyrroles
  • pyracrimycin A
  • Serine
  • Carbon
  • Proline
  • Mixed Function Oxygenases