Secondary zoonotic dog-to-human transmission of SARS-CoV-2 suggested by timeline but refuted by viral genome sequencing

Infection. 2023 Feb;51(1):253-259. doi: 10.1007/s15010-022-01902-y. Epub 2022 Aug 20.

Abstract

Purpose: The risk of secondary zoonotic transmission of SARS-CoV-2 from pet animals remains unclear. Here, we report on a 44 year old Caucasian male presenting to our clinic with COVID-19 pneumonia, who reported that his dog displayed respiratory signs shortly prior to his infection. The dog tested real-time-PCR (RT-PCR) positive for SARS-CoV-2 RNA and the timeline of events suggested a transmission from the dog to the patient.

Methods: RT-PCR and serological assays were used to confirm SARS-CoV-2 infection in the nasopharyngeal tract in the dog and the patient. We performed SARS-CoV-2-targeted amplicon-based next generation sequencing of respiratory samples from the dog and patient for sequence comparisons.

Results: SARS-CoV-2 infection of the dog was confirmed by three independent PCR-positive pharyngeal swabs and subsequent seroconversion. Sequence analysis identified two separate SARS-CoV-2 lineages in the canine and the patient's respiratory samples. The timeline strongly suggested dog-to-human transmission, yet due to the genetic distance of the canine and the patient's samples paired-transmission was highly unlikely.

Conclusion: The results of this case support current knowledge about the low risk of secondary zoonotic dog-to-human transmissions of SARS-CoV-2 and emphasizes the strength of genomic sequencing in deciphering viral transmission chains.

Keywords: Antibodies; COVID-19; Canine; RT-PCR; Reverse zoonosis; SARS-CoV-2; Secondary zoonosis; Sequencing; Zoonotic spillover.

MeSH terms

  • Adult
  • Animals
  • COVID-19* / diagnosis
  • Dogs
  • Genome, Viral
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Male
  • RNA, Viral / genetics
  • Real-Time Polymerase Chain Reaction
  • SARS-CoV-2* / genetics

Substances

  • RNA, Viral