Copper starvation induces antimicrobial isocyanide integrated into two distinct biosynthetic pathways in fungi

Nat Commun. 2022 Aug 16;13(1):4828. doi: 10.1038/s41467-022-32394-x.

Abstract

The genomes of many filamentous fungi, such as Aspergillus spp., include diverse biosynthetic gene clusters of unknown function. We previously showed that low copper levels upregulate a gene cluster that includes crmA, encoding a putative isocyanide synthase. Here we show, using untargeted comparative metabolomics, that CrmA generates a valine-derived isocyanide that contributes to two distinct biosynthetic pathways under copper-limiting conditions. Reaction of the isocyanide with an ergot alkaloid precursor results in carbon-carbon bond formation analogous to Strecker amino-acid synthesis, producing a group of alkaloids we term fumivalines. In addition, valine isocyanide contributes to biosynthesis of a family of acylated sugar alcohols, the fumicicolins, which are related to brassicicolin A, a known isocyanide from Alternaria brassicicola. CrmA homologs are found in a wide range of pathogenic and non-pathogenic fungi, some of which produce fumicicolin and fumivaline. Extracts from A. fumigatus wild type (but not crmA-deleted strains), grown under copper starvation, inhibit growth of diverse bacteria and fungi, and synthetic valine isocyanide shows antibacterial activity. CrmA thus contributes to two biosynthetic pathways downstream of trace-metal sensing.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Anti-Bacterial Agents / metabolism
  • Anti-Infective Agents* / metabolism
  • Aspergillus fumigatus / metabolism
  • Biosynthetic Pathways*
  • Carbon / metabolism
  • Copper / metabolism
  • Cyanides
  • Fungi / genetics
  • Multigene Family
  • Valine / genetics

Substances

  • Anti-Bacterial Agents
  • Anti-Infective Agents
  • Cyanides
  • Carbon
  • Copper
  • Valine