Interrupting specific hydrogen bonds between ELF3 and MED23 as an alternative drug resistance-free strategy for HER2-overexpressing cancers

J Adv Res. 2023 May:47:173-187. doi: 10.1016/j.jare.2022.08.003. Epub 2022 Aug 10.

Abstract

Introduction: HER2 overexpression induces cancer aggression and frequent recurrences in many solid tumors. Because HER2 overproduction is generally followed by gene amplification, inhibition of protein-protein interaction (PPI) between transcriptional factor ELF3 and its coactivator MED23 has been considered an effective but challenging strategy.

Objectives: This study aimed to determine the hotspot of ELF3-MED23 PPI and further specify the essential residues and their key interactions in the hotspot which are controllable by small molecules with significant anticancer activity.

Methods: Intensive biological evaluation methods including SEAP, fluorescence polarization, LC-MS/MS-based quantitative, biosensor, GST-pull down assays, and in silico structural analysis were performed to determine hotspot of ELF3-MED23 PPI and to elicit YK1, a novel small molecule PPI inhibitor. The effects of YK1 on possible PPIs of MED23 and the efficacy of trastuzumab were assessed using cell culture and tumor xenograft mouse models.

Results: ELF3-MED23 PPI was found to be specifically dependent on H-bondings between D400, H449 of MED23 and W138, I140 of ELF3 for upregulating HER2 gene transcription. Employing YK1, we confirmed that interruption on these H-bondings significantly attenuated the HER2-mediated oncogenic signaling cascades and exhibited significant in vitro and in vivo anticancer activity against HER2-overexpressing breast and gastric cancers even in their trastuzumab refractory clones.

Conclusion: Our approach to develop specific ELF3-MED23 PPI inhibitor without interfering other PPIs of MED23 can finally lead to successful development of a drug resistance-free compound to interrogate HER2 biology in diverse conditions of cancers overexpressing HER2.

Keywords: ELF3-MED23 interaction; HER2 transcriptional downregulator; Hotspot identification; Small molecule PPI inhibitor; Trastuzumab resistance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antibodies, Monoclonal, Humanized / pharmacology
  • Antineoplastic Agents* / pharmacology
  • Antineoplastic Agents* / therapeutic use
  • Chromatography, Liquid
  • DNA-Binding Proteins / genetics
  • Humans
  • Hydrogen Bonding
  • Mediator Complex
  • Mice
  • Neoplasms*
  • Proto-Oncogene Proteins c-ets
  • Receptor, ErbB-2 / metabolism
  • Tandem Mass Spectrometry
  • Transcription Factors
  • Trastuzumab / pharmacology

Substances

  • Antineoplastic Agents
  • Receptor, ErbB-2
  • Antibodies, Monoclonal, Humanized
  • Trastuzumab
  • ELF3 protein, human
  • DNA-Binding Proteins
  • Transcription Factors
  • Proto-Oncogene Proteins c-ets
  • Med23 protein, mouse
  • Mediator Complex