Architecture and self-assembly of the jumbo bacteriophage nuclear shell

Nature. 2022 Aug;608(7922):429-435. doi: 10.1038/s41586-022-05013-4. Epub 2022 Aug 3.

Abstract

Bacteria encode myriad defences that target the genomes of infecting bacteriophage, including restriction-modification and CRISPR-Cas systems1. In response, one family of large bacteriophages uses a nucleus-like compartment to protect its replicating genomes by excluding host defence factors2-4. However, the principal composition and structure of this compartment remain unknown. Here we find that the bacteriophage nuclear shell assembles primarily from one protein, which we name chimallin (ChmA). Combining cryo-electron tomography of nuclear shells in bacteriophage-infected cells and cryo-electron microscopy of a minimal chimallin compartment in vitro, we show that chimallin self-assembles as a flexible sheet into closed micrometre-scale compartments. The architecture and assembly dynamics of the chimallin shell suggest mechanisms for its nucleation and growth, and its role as a scaffold for phage-encoded factors mediating macromolecular transport, cytoskeletal interactions, and viral maturation.

MeSH terms

  • Bacteria* / cytology
  • Bacteria* / immunology
  • Bacteria* / metabolism
  • Bacteria* / virology
  • Bacteriophages* / chemistry
  • Bacteriophages* / immunology
  • Bacteriophages* / physiology
  • Bacteriophages* / ultrastructure
  • Cell Compartmentation*
  • Cryoelectron Microscopy
  • Viral Proteins* / chemistry
  • Viral Proteins* / metabolism
  • Viral Proteins* / ultrastructure
  • Virus Assembly*

Substances

  • Viral Proteins