Hollow-Core Fiber-Based Biosensor: A Platform for Lab-in-Fiber Optical Biosensors for DNA Detection

Sensors (Basel). 2022 Jul 8;22(14):5144. doi: 10.3390/s22145144.

Abstract

In this paper, a novel platform for lab-in-fiber-based biosensors is studied. Hollow-core tube lattice fibers (HC-TLFs) are proposed as a label-free biosensor for the detection of DNA molecules. The particular light-guiding mechanism makes them a highly sensitive tool. Their transmission spectrum is featured by alternations of high and low transmittance at wavelength regions whose values depend on the thickness of the microstructured web composing the cladding around the hollow core. In order to achieve DNA detection by using these fibers, an internal chemical functionalization process of the fiber has been performed in five steps in order to link specific peptide nucleic acid (PNA) probes, then the functionalized fiber was used for a three-step assay. When a solution containing a particular DNA sequence is made to flow through the HC of the TLF in an 'optofluidic' format, a bio-layer is formed on the cladding surfaces causing a red-shift of the fiber transmission spectrum. By comparing the fiber transmission spectra before and after the flowing it is possible to identify the eventual formation of the layer and, therefore, the presence or not of a particular DNA sequence in the solution.

Keywords: DNA detection; biosensor; hollow-core; optical fiber.

MeSH terms

  • Biosensing Techniques*
  • DNA / chemistry
  • Nucleic Acid Probes
  • Optical Fibers
  • Peptide Nucleic Acids* / chemistry

Substances

  • Nucleic Acid Probes
  • Peptide Nucleic Acids
  • DNA

Grants and funding

This work has benefited from the equipment and framework of the COMP-HUB Initiative, funded by the ‘Departments of Excellence’ program of the Italian Ministry for Education, University and Research (MIUR, 2018-2022) for the Department of Chemistry, Life Sciences and Environmental Sustainability of the University of Parma.