Immune-Related Genomic Schizophrenic Subtyping Identified in DLPFC Transcriptome

Genes (Basel). 2022 Jul 4;13(7):1200. doi: 10.3390/genes13071200.

Abstract

Well-documented evidence of the physiologic, genetic, and behavioral heterogeneity of schizophrenia suggests that diagnostic subtyping may clarify the underlying pathobiology of the disorder. Recent studies have demonstrated that increased inflammation may be a prominent feature of a subset of schizophrenics. However, these findings are inconsistent, possibly due to evaluating schizophrenics as a single group. In this study, we segregated schizophrenic patients into two groups ("Type 1", "Type 2") by their gene expression in the dorsolateral prefrontal cortex and explored biological differences between the subgroups. The study included post-mortem tissue samples that were sequenced in multiple, publicly available gene datasets using different sequencing methods. To evaluate the role of inflammation, the expression of genes in multiple components of neuroinflammation were examined: complement cascade activation, glial cell activation, pro-inflammatory mediator secretion, blood-brain barrier (BBB) breakdown, chemokine production and peripheral immune cell infiltration. The Type 2 schizophrenics showed widespread abnormal gene expression across all the neuroinflammation components that was not observed in Type 1 schizophrenics. Our results demonstrate the importance of separating schizophrenic patients into their molecularly defined subgroups and provide supporting evidence for the involvement of the immune-related pathways in a schizophrenic subset.

Keywords: inflammation; schizophrenia; subtypes; transcriptome.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Dorsolateral Prefrontal Cortex
  • Genomics
  • Humans
  • Inflammation / genetics
  • Inflammation / metabolism
  • Prefrontal Cortex / metabolism
  • Schizophrenia* / genetics
  • Schizophrenia* / metabolism
  • Transcriptome* / genetics

Grants and funding

This work was supported by grants from the Office of Naval Research n. N00014-19-1-2434, N00014-16-1-2359, and N00014-21-1-229.