Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer

Curr Oncol. 2022 Jul 12;29(7):4923-4935. doi: 10.3390/curroncol29070391.

Abstract

Background: Gastric cancer is a prevalent cause of tumor death. Tumor immunotherapy aims to reshape the specific immunity to tumors in order to kill the tumor. LncRNAs play a pivotal role in regulating the tumor immune microenvironment. Herein, immune-related lncRNAs were used to establish a prognosis risk-assessment model for gastric cancer and provide personalized predictions while providing insights and targets for gastric cancer treatment to enhance patient prognosis.

Methods: Gastric adenocarcinoma transcriptome and clinical data were acquired from the The Cancer Genome Atlas (TCGA) database to screen the immune-related lncRNAs. Then, LASSO COX regression was utilized to construct the prognosis risk-assessment model. Afterward, the reliability of the model was evaluated the relationship between immune infiltration, clinical characteristics, and the model was analyzed.

Results: We identified 13 lncRNAs and constructed the prognosis assessment model. According to the median risk score of the training set, the patients were assigned to different risk groups. Overall survival time was shorter in the high-risk group. In the high-risk group, higher infiltration of mono-macrophages, dendritic cells, CD4+ T cells, and CD8+ T cells was observed. Moreover, the model was positively related to tumor metastasis.

Conclusion: The prognosis risk-assessment model developed in this research can effectively predict the prognosis of gastric cancer patients. This tool is expected to be further applied to clinics in the future, thus providing a novel target for immunotherapy in gastric cancer patients.

Keywords: gastric cancer; immune infiltration; lncRNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Gene Expression Regulation, Neoplastic
  • Humans
  • Prognosis
  • RNA, Long Noncoding* / genetics
  • Reproducibility of Results
  • Stomach Neoplasms* / genetics
  • Stomach Neoplasms* / therapy
  • Tumor Microenvironment / genetics

Substances

  • RNA, Long Noncoding

Grants and funding

This research was funded by Natural Science Foundation of Guangdong Province, China, grant number 2021A1515012029.