A novel method to detect the early warning signal of COVID-19 transmission

BMC Infect Dis. 2022 Jul 18;22(1):626. doi: 10.1186/s12879-022-07603-z.

Abstract

Background: Infectious illness outbreaks, particularly the corona-virus disease 2019 (COVID-19) pandemics in recent years, have wreaked havoc on human society, and the growing number of infected patients has put a strain on medical facilities. It's necessary to forecast early warning signals of potential outbreaks of COVID-19, which would facilitate the health ministry to take some suitable control measures timely to prevent or slow the spread of COVID-19. However, since the intricacy of COVID-19 transmission, which connects biological and social systems, it is a difficult task to predict outbreaks of COVID-19 epidemics timely.

Results: In this work, we developed a new model-free approach, called, the landscape network entropy based on Auto-Reservoir Neural Network (ARNN-LNE), for quantitative analysis of COVID-19 propagation, by mining dynamic information from regional networks and short-term high-dimensional time-series data. Through this approach, we successfully identified the early warning signals in six nations or areas based on historical data of COVID-19 infections.

Conclusion: Based on the newly published data on new COVID-19 disease, the ARNN-LNE method can give early warning signals for the outbreak of COVID-19. It's worth noting that ARNN-LNE only relies on small samples data. Thus, it has great application potential for monitoring outbreaks of infectious diseases.

Keywords: Auto-reservoir neural network (ARNN); Coronavirus disease 2019 (COVID-19); Early warning signals (EWS); Landscape network entropy (LNE).

MeSH terms

  • COVID-19* / diagnosis
  • Communicable Diseases* / epidemiology
  • Disease Outbreaks / prevention & control
  • Humans
  • Pandemics
  • Research Design