Recognition of the TDP-43 nuclear localization signal by importin α1/β

Cell Rep. 2022 Jun 28;39(13):111007. doi: 10.1016/j.celrep.2022.111007.

Abstract

Cytoplasmic mislocalization of the TAR-DNA binding protein of 43 kDa (TDP-43) leads to large, insoluble aggregates that are a hallmark of amyotrophic lateral sclerosis and frontotemporal dementia. Here, we study how importin α1/β recognizes TDP-43 bipartite nuclear localization signal (NLS). We find that the NLS makes extensive contacts with importin α1, especially at the minor NLS-binding site. NLS binding results in steric clashes with the C terminus of importin α1 that disrupts the TDP-43 N-terminal domain (NTD) dimerization interface. A putative phosphorylation site in the proximity of TDP-43 R83 at the minor NLS site destabilizes binding to importins by reducing the NLS backbone dynamics. Based on these data, we explain the pathogenic role of several post-translational modifications and mutations in the proximity of TDP-43 minor NLS site that are linked to disease and shed light on the chaperone activity of importin α1/β.

Keywords: ALS; CP: Cell biology; CP: Neuroscience; TDP-43; importin α; nuclear import; nuclear localization signal; phosphorylation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Cell Nucleus / metabolism
  • DNA-Binding Proteins / metabolism
  • Nuclear Localization Signals* / metabolism
  • alpha Karyopherins / genetics
  • alpha Karyopherins / metabolism
  • beta Karyopherins* / genetics
  • beta Karyopherins* / metabolism

Substances

  • DNA-Binding Proteins
  • Nuclear Localization Signals
  • alpha Karyopherins
  • beta Karyopherins
  • karyopherin alpha 2