Gas exchange analysers exhibit large measurement error driven by internal thermal gradients

New Phytol. 2022 Oct;236(2):369-384. doi: 10.1111/nph.18347. Epub 2022 Jul 30.

Abstract

Portable gas exchange analysers provide critical data for understanding plant-atmosphere carbon and water fluxes, and for parameterising Earth system models that forecast climate change effects and feedbacks. We characterised temperature measurement errors in the Li-Cor LI-6400XT and LI-6800, and estimated downstream errors in derived quantities, including stomatal conductance (gsw ) and leaf intercellular CO2 concentration (Ci ). The LI-6400XT exhibited air temperature errors (differences between reported air temperature and air temperature measured near the leaf) up to 7.2°C, leaf temperature errors up to 5.3°C, and relative errors in gsw and Ci that increased as temperatures departed from ambient. This caused errors in leaf-to-air temperature relationships, assimilation-temperature curves and CO2 response curves. Temperature dependencies of maximum Rubisco carboxylation rate (Vcmax ) and maximum RuBP regeneration rate (Jmax ) showed errors of 12% and 35%, respectively. These errors are likely to be idiosyncratic and may differ among machines and environmental conditions. The LI-6800 exhibited much smaller errors. Earth system model predictions may be erroneous, as much of their parametrisation data were measured on the LI-6400XT system, depending on the methods used. We make recommendations for minimising errors and correcting data in the LI-6400XT. We also recommend transitioning to the LI-6800 for future data collection.

Keywords: LI-6400XT; LI-6800; air temperature; ecophysiology; energy budget; leaf temperature; photosynthesis; thermoregulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbon
  • Carbon Dioxide
  • Photosynthesis* / physiology
  • Plant Leaves / physiology
  • Ribulose-Bisphosphate Carboxylase* / metabolism
  • Temperature
  • Water

Substances

  • Water
  • Carbon Dioxide
  • Carbon
  • Ribulose-Bisphosphate Carboxylase