Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography

J Imaging. 2022 May 31;8(6):156. doi: 10.3390/jimaging8060156.

Abstract

We propose a pipeline for synthetic generation of personalized Computer Tomography (CT) images, with a radiation exposure evaluation and a lifetime attributable risk (LAR) assessment. We perform a patient-specific performance evaluation for a broad range of denoising algorithms (including the most popular deep learning denoising approaches, wavelets-based methods, methods based on Mumford−Shah denoising, etc.), focusing both on accessing the capability to reduce the patient-specific CT-induced LAR and on computational cost scalability. We introduce a parallel Probabilistic Mumford−Shah denoising model (PMS) and show that it markedly-outperforms the compared common denoising methods in denoising quality and cost scaling. In particular, we show that it allows an approximately 22-fold robust patient-specific LAR reduction for infants and a 10-fold LAR reduction for adults. Using a normal laptop, the proposed algorithm for PMS allows cheap and robust (with a multiscale structural similarity index >90%) denoising of very large 2D videos and 3D images (with over 107 voxels) that are subject to ultra-strong noise (Gaussian and non-Gaussian) for signal-to-noise ratios far below 1.0. The code is provided for open access.

Keywords: LAR reduction; Mumford–Shah formalism; denoising; nonparametric methods.

Grants and funding

This work was supported by the “Emergent AI Center” of the JGU Mainz (financed by the Carl-Zeiss-Stiftung) and by the Mercator Fellowship in the DFG Collaborative Research Center 1114 “Scaling Cascades in Complex Systems”.