CRISPR-Cas9 based gene editing of the immune checkpoint NKG2A enhances NK cell mediated cytotoxicity against multiple myeloma

Oncoimmunology. 2022 May 31;11(1):2081415. doi: 10.1080/2162402X.2022.2081415. eCollection 2022.

Abstract

Natural Killer (NK) cells are known for their high intrinsic cytotoxic capacity, and the possibility to be applied as 'off-the-shelf' product makes them highly attractive for cell-based immunotherapies. In patients with multiple myeloma (MM), an elevated number of NK cells has been correlated with higher overall-survival rate. However, NK cell function can be impaired by upregulation of inhibitory receptors, such as the immune checkpoint NKG2A. Here, we developed a CRISPR-Cas9-based gene editing protocol that allowed us to knockout about 80% of the NKG2A-encoding killer cell lectin like receptor C1 (KLRC1) locus in primary NK cells. In-depth phenotypic analysis confirmed significant reduction in NKG2A protein expression. Importantly, the KLRC1-edited NK cells showed significantly increased cytotoxicity against primary MM cells isolated from a small cohort of patients, and maintained the NK cell-specific cytokine production. In conclusion, KLRC1-editing in primary NK cells has the prospect of overcoming immune checkpoint inhibition in clinical applications.

Keywords: CRISPR-Cas; Genome editing; HLA-E; KLRC1; NK cells; NKG2A; immunotherapy; inhibitory receptors; multiple myeloma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • CRISPR-Cas Systems / genetics
  • Gene Editing
  • Humans
  • Killer Cells, Natural / metabolism
  • Multiple Myeloma* / genetics
  • Multiple Myeloma* / therapy
  • NK Cell Lectin-Like Receptor Subfamily C* / genetics
  • NK Cell Lectin-Like Receptor Subfamily C* / metabolism

Substances

  • NK Cell Lectin-Like Receptor Subfamily C

Grants and funding

This work was supported by the German Research Foundation /Deutsche Forschungsgemeinschaft DFG, project number 318346496, SFB1292/2 TP12 (to E.U.) and CRC /IRTG 1292 (to E.U. and T.B.) and CRC 1160 (to T.C.), by the German Cancer Aid / Deutsche Krebshilfe (MSNZ stipend to T.B.), and by the Alfred and Angelika Gutermuth Foundation.