A new quinolinone-chalcone hybrid with potential antibacterial and herbicidal properties using in silico approaches

J Mol Model. 2022 Jun 2;28(6):176. doi: 10.1007/s00894-022-05140-9.

Abstract

Quinolinone-chalcones are hybrid compounds consisting of chalcone and quinolone moieties with biological activity related to their hybrid structure. This work seeks to describe the structural and theoretical parameters related to the physicochemical properties and biological activity of a new quinolinone-chalcone. The synthesis, structural characterization by X-ray diffraction, molecular topology by Hirshfeld surfaces and QTAIM, molecular electronic calculations, and pharmacophore analysis were described. The weak interactions C-HO, C-Hπ, and C-HBr were responsible for crystal growth and stabilized the crystalline state. The DFT analysis shows that the sulfonamide group region is susceptible to observed interactions, and the frontier molecular orbitals indicate high kinetic stability. Also, pharmacophore analysis revealed potential antibacterial and herbicidal activity; by docking within the active site of TtgR, a transcription regulator for the efflux pump TtgABC from the highly resistant Pseudomonas putida (P. putida) strain DOT-TIE, we showed that the activation of TtgR relies upon the binding of aromatic-harboring compounds, which plays a crucial role in bacterial evasion. In this context, a new quinolinone-chalcone has a higher binding affinity than tetracycline, which suggests it might be a better effector for TtgR.

Keywords: Molecular modeling; Potential herbicide activity; QTAIM analysis; Quinolinone-chalcone.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / chemistry
  • Chalcone*
  • Chalcones* / pharmacology
  • Herbicides*
  • Quinolones* / pharmacology
  • Repressor Proteins / chemistry
  • Repressor Proteins / metabolism

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Chalcones
  • Herbicides
  • Quinolones
  • Repressor Proteins
  • Chalcone