An early warning system for emerging SARS-CoV-2 variants
Nat Med
.
2022 Jun;28(6):1110-1115.
doi: 10.1038/s41591-022-01836-w.
Authors
Lorenzo Subissi
1
,
Anne von Gottberg
2
3
,
Lipi Thukral
4
,
Nathalie Worp
5
6
,
Bas B Oude Munnink
5
6
,
Surabhi Rathore
4
,
Laith J Abu-Raddad
7
,
Ximena Aguilera
8
,
Erik Alm
9
,
Brett N Archer
1
,
Homa Attar Cohen
1
,
Amal Barakat
10
,
Wendy S Barclay
11
,
Jinal N Bhiman
2
3
,
Leon Caly
12
,
Meera Chand
13
,
Mark Chen
14
,
Ann Cullinane
15
,
Tulio de Oliveira
16
,
Christian Drosten
17
,
Julian Druce
8
,
Paul Effler
18
,
Ihab El Masry
19
,
Adama Faye
20
,
Simani Gaseitsiwe
21
22
,
Elodie Ghedin
23
,
Rebecca Grant
1
,
Bart L Haagmans
5
6
,
Belinda L Herring
24
,
Shilpa S Iyer
25
,
Zyleen Kassamali
1
,
Manish Kakkar
26
,
Rebecca J Kondor
27
,
Juliana A Leite
28
,
Yee-Sin Leo
14
,
Gabriel M Leung
29
,
Marco Marklewitz
30
,
Sikhulile Moyo
21
22
,
Jairo Mendez-Rico
28
,
Nada M Melhem
31
,
Vincent Munster
32
,
Karen Nahapetyan
30
,
Djin-Ye Oh
33
,
Boris I Pavlin
1
,
Thomas P Peacock
11
13
,
Malik Peiris
29
,
Zhibin Peng
34
,
Leo L M Poon
29
,
Andrew Rambaut
35
,
Jilian Sacks
1
,
Yinzhong Shen
36
,
Marilda M Siqueira
37
,
Sofonias K Tessema
38
,
Erik M Volz
11
,
Volker Thiel
39
40
,
Sylvie van der Werf
41
,
Sylvie Briand
1
,
Mark D Perkins
1
,
Maria D Van Kerkhove
42
,
Marion P G Koopmans
5
6
,
Anurag Agrawal
43
Affiliations
1
World Health Organization, Geneva, Switzerland.
2
National Institute for Communicable Diseases, Johannesburg, South Africa.
3
School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
4
CSIR Institute of Genomics and Integrative Biology, Delhi, India.
5
Erasmus Medical Centre, Rotterdam, the Netherlands.
6
Pandemic and Disaster Preparedness Research Centre, Rotterdam/Delft, the Netherlands.
7
Weill Cornell Medicine - Qatar of Cornell University, Doha, Qatar.
8
Epidemiology and Health Policy Centre, Universidad del Desarollo, Santiago, Chile.
9
European Centre for Disease Prevention and Control, Stockholm, Sweden.
10
World Health Organization Regional Office for the Eastern Mediterranean, Cairo, Egypt.
11
Imperial College London, London, UK.
12
Victorian Infectious Diseases Reference Laboratory, Melbourne, Victoria, Australia.
13
UK Health Security Agency, London, UK.
14
National Centre for Infectious Diseases, Singapore, Singapore.
15
World Organisation for Animal Health, Paris, France.
16
Centre for Epidemic Response and Innovation, Stellenbosch University, Stellenbosch, South Africa.
17
Charité Medical Center, Berlin, Germany.
18
University of Western Australia, Perth, Western Australia, Australia.
19
Food and Agriculture Organization, Rome, Italy.
20
Institut de Santé et Développement, Université Cheikh Anta Diop, Dakar, Senegal.
21
Botswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
22
Harvard T.H Chan School of Public Health, Department of Immunology & Infectious Diseases, Boston, MA, USA.
23
National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
24
World Health Organization Regional Office for Africa, Brazzaville, Republic of Congo.
25
World Health Organization Regional Office for Western Pacific, Manila, The Philippines.
26
World Health Organization Regional Office for South-East Asia, New Delhi, India.
27
United States Centers for Disease Control and Prevention, Atlanta, GA, USA.
28
World Health Organization Regional Office for the Americas, Washington, DC, USA.
29
School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, The People's Republic of China.
30
World Health Organization Regional Office for Europe, Copenhagen, Denmark.
31
American University of Beirut, Beirut, Lebanon.
32
National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rocky Mountain Laboratories, Hamilton, MT, USA.
33
Robert Koch Institute, Berlin, Germany.
34
Chinese Center for Disease Control and Prevention, Beijing, The People's Republic of China.
35
University of Edinburgh, Edinburgh, UK.
36
Shanghai Public Health Clinical Center, Fudan University, Shanghai, The People's Republic of China.
37
Oswaldo Cruz Institute, Fiocruz, Rio de Janeiro, Brazil.
38
Africa Centers for Disease Control and Prevention, Addis Ababa, Ethiopia.
39
Multidisciplinary Center for Infectious Diseases, University of Bern, Bern, Switzerland.
40
Institute of Virology and Immunology, Mittelhäusern and Bern, Switzerland.
41
Institut Pasteur, Université Paris Cité, Paris, France.
42
World Health Organization, Geneva, Switzerland. vankerkhovem@who.int.
43
Trivedi School of Biosciences, Ashoka University, Sonipat, India.
PMID:
35637337
DOI:
10.1038/s41591-022-01836-w
No abstract available
MeSH terms
COVID-19*
Humans
SARS-CoV-2* / genetics
Supplementary concepts
SARS-CoV-2 variants
Grants and funding
001/WHO_/World Health Organization/International
MR/R015600/1/MRC_/Medical Research Council/United Kingdom