Induced Pluripotent Stem Cell-Based Drug Screening by Use of Artificial Intelligence

Pharmaceuticals (Basel). 2022 Apr 30;15(5):562. doi: 10.3390/ph15050562.

Abstract

Induced pluripotent stem cells (iPSCs) are terminally differentiated somatic cells that differentiate into various cell types. iPSCs are expected to be used for disease modeling and for developing novel treatments because differentiated cells from iPSCs can recapitulate the cellular pathology of patients with genetic mutations. However, a barrier to using iPSCs for comprehensive drug screening is the difficulty of evaluating their pathophysiology. Recently, the accuracy of image analysis has dramatically improved with the development of artificial intelligence (AI) technology. In the field of cell biology, it has become possible to estimate cell types and states by examining cellular morphology obtained from simple microscopic images. AI can evaluate disease-specific phenotypes of iPS-derived cells from label-free microscopic images; thus, AI can be utilized for disease-specific drug screening using iPSCs. In addition to image analysis, various AI-based methods can be applied to drug development, including phenotype prediction by analyzing genomic data and virtual screening by analyzing structural formulas and protein-protein interactions of compounds. In the future, combining AI methods may rapidly accelerate drug discovery using iPSCs. In this review, we explain the details of AI technology and the application of AI for iPSC-based drug screening.

Keywords: artificial intelligence; deep learning; drug screening; image recognition; induced pluripotent stem cell; machine learning.

Publication types

  • Review

Grants and funding

Grants-in-Aid for Scientific Research (JSPS KAKENHI, Grant Number 19K08549), Grant for Basic Research of the Japanese Circulation Society (2020), Kowa Life Science Foundation, Nakatani foundation, Keio Gijuku Academic Development Funds, and the Keio University Medical Science Fund.