Single-Cell Transcriptomics of Liver Cancer: Hype or Insights?

Cell Mol Gastroenterol Hepatol. 2022;14(3):513-525. doi: 10.1016/j.jcmgh.2022.04.014. Epub 2022 May 14.

Abstract

Hepatocellular carcinoma (HCC) is characterized by its high degrees of both inter- and intratumoral heterogeneity. Its complex tumor microenvironment is also crucial in promoting tumor progression. Recent advances in single-cell RNA sequencing provide an important highway to characterize the underlying pathogenesis and heterogeneity of HCC in an unprecedented degree of resolution. This review discusses the up-to-date discoveries from the latest studies of HCC with respect to the strength of single-cell RNA sequencing. We discuss its use in the dissection of the landscape of the intricate HCC ecosystem and highlight the major features at cellular levels, including the malignant cells, different immune cell types, and the various cell-cell interactions, which are crucial for developing effective immunotherapies. Finally, its translational applications will be discussed. Altogether, these explorations may give us some hints at the tumor growth and progression and drug resistance and recurrence, particularly in this era of personalized medicine.

Keywords: Hepatocellular Carcinoma; Immune Tumor Microenvironment; Single-Cell RNA-Sequencing.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinoma, Hepatocellular* / pathology
  • Ecosystem
  • Humans
  • Liver Neoplasms* / pathology
  • Transcriptome / genetics
  • Tumor Microenvironment / genetics