Biosynthetic Gene Cluster of Linaridin Peptides Contains Epimerase Gene

Chembiochem. 2022 Jun 20;23(12):e202100705. doi: 10.1002/cbic.202100705. Epub 2022 May 12.

Abstract

Salinipeptins belong to the type-A linaridin class of ribosomally synthesized and post-translationally modified peptides (RiPPs) comprising 22 amino acid residues with multiple D-amino acids. Although chirality of other type-A linaridins, such as grisemycin and cypemycin, has not been reported, the biosynthetic gene clusters of type-A linaridins have identical gene organization. Here, we report heterologous expression of grisemycin biosynthetic gene cluster (grm) and show that grisemycin contains multiple D-amino acids, similar to salinipeptins. The heterologous expression experiments also confirm the involvement of a novel peptide epimerase in grisemycin biosynthesis. Gene-deletion experiments indicate that grmL, a single gene with unknown function, is indispensable for grisemycin production. We also show that the presence of D-amino acids is likely a common feature of linaridin natural products by analyzing two other type-A linaridin clusters.

Keywords: D-amino acids; biosynthesis; epimerases; linaridin; peptides.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / metabolism
  • Multigene Family
  • Peptides / chemistry
  • Protein Processing, Post-Translational*
  • Racemases and Epimerases* / genetics
  • Racemases and Epimerases* / metabolism

Substances

  • Amino Acids
  • Peptides
  • Racemases and Epimerases