Automation of RIDA®GENE Helicobacter pylori PCR on the BD MAX™ System

Eur J Clin Microbiol Infect Dis. 2022 Jun;41(6):875-879. doi: 10.1007/s10096-022-04444-1. Epub 2022 Apr 22.

Abstract

PCR detection of Helicobacter pylori infection in gastric biopsies allows the detection of this bacterium and the mutations associated with macrolide resistance. The aim of this study was to evaluate the performance of RIDA®GENE H. pylori PCR (r-Biopharm) on a BD MAX™ System (Becton Dickinson). Two hundred ten gastric biopsies obtained were included. These biopsies were ground in nutrient broth. Two hundred microliters of this suspension was treated with proteinase K; 200 µL was transferred to a BD MAX™ sample tube then tested using RIDA®GENE H. pylori PCR reagents. In-house H. pylori PCR was used as a reference. The sensitivity of RIDA®GENE H. pylori PCR with BD MAX™ was 100%, the specificity was 99.08% (95% confidence interval (CI), 97.21-100%), the PPV was 99.02% (95% CI, 97.09-100%), and the NPV was 100% for the detection of H. pylori. The sensitivity was 97.14% (95% CI, 93.87-100%), the specificity was 100%, the PPV was 100%, and the NPV was 98.48% (95% CI, 96.08-100%) for categorization of macrolides resistance. The adaptation of RIDA®GENE H. pylori PCR on the BD MAX™ System is of considerable interest for microbiologists who seek to establish this assay in their laboratories.

Keywords: Automation; BD MAX™; Clarithromycin resistance; H. pylori; PCR.

MeSH terms

  • Animals
  • Anti-Bacterial Agents / pharmacology
  • Anti-Bacterial Agents / therapeutic use
  • Automation
  • Biopsy
  • Clarithromycin
  • Drug Resistance, Bacterial / genetics
  • Helicobacter Infections* / diagnosis
  • Helicobacter Infections* / drug therapy
  • Helicobacter pylori* / genetics
  • Humans
  • Macrolides / therapeutic use
  • Microbial Sensitivity Tests
  • Polymerase Chain Reaction
  • Scrapie*
  • Sheep / genetics

Substances

  • Anti-Bacterial Agents
  • Macrolides
  • Clarithromycin