Spectroscopic and Molecular Docking Investigation on the Interaction of Cumin Components with Plasma Protein: Assessment of the Comparative Interactions of Aldehyde and Alcohol with Human Serum Albumin

Int J Mol Sci. 2022 Apr 7;23(8):4078. doi: 10.3390/ijms23084078.

Abstract

The interaction of the important plasma protein, human serum albumin (HSA), with two monoterpenes found in cumin oil, i.e., cuminaldehyde (4-isopropylbenzaldehyde) and cuminol (4-isopropylbenzyl alcohol), was studied in this paper. Both experimental and computational methods were utilized to understand the mechanism of binding. The UV absorption profile of HSA changes in the presence of both cuminaldehyde and cuminol, due to the interaction between HSA with both monoterpenes. The intrinsic fluorescence intensity of HSA was also quenched on the sequential addition of both ligands, due to change in the microenvironment of the fluorophore present in the former. Quenching of HSA by cuminaldehyde was much higher in comparison to that in the presence of cuminol. Fluorescence quenching data were analyzed using modified Stern-Volmer and Lineweaver-Burk methods, which suggested that the binding mechanism was of a static type for both ligands. In both cases, the binding was favored by the domination of hydrophobic as well as hydrogen bonding/Van der Waals forces. Both ligands partially unfolded the secondary structure of HSA, although the effect of cuminaldehyde was more pronounced, as compared to cuminol. The preferred binding site of cuminaldehyde and cuminol inside HSA was also the same; namely, drug binding site 1, located in subdomain IIA. The study showed that cuminaldehyde binds strongly with albumin as compared to its alcohol counterpart, which is due to the more hydrophobic nature of the former.

Keywords: albumin; aldehyde and alcohol; cumin components; cuminol; fluorescence; molecular docking.

MeSH terms

  • Aldehydes
  • Binding Sites
  • Circular Dichroism
  • Cuminum*
  • Humans
  • Ligands
  • Molecular Docking Simulation
  • Monoterpenes
  • Protein Binding
  • Serum Albumin, Human* / chemistry
  • Spectrometry, Fluorescence
  • Thermodynamics

Substances

  • Aldehydes
  • Ligands
  • Monoterpenes
  • Serum Albumin, Human