The TH1 cell lineage-determining transcription factor T-bet suppresses TH2 gene expression by redistributing GATA3 away from TH2 genes

Nucleic Acids Res. 2022 May 6;50(8):4557-4573. doi: 10.1093/nar/gkac258.

Abstract

Lineage-determining transcription factors (LD-TFs) drive the differentiation of progenitor cells into a specific lineage. In CD4+ T cells, T-bet dictates differentiation of the TH1 lineage, whereas GATA3 drives differentiation of the alternative TH2 lineage. However, LD-TFs, including T-bet and GATA3, are frequently co-expressed but how this affects LD-TF function is not known. By expressing T-bet and GATA3 separately or together in mouse T cells, we show that T-bet sequesters GATA3 at its target sites, thereby removing GATA3 from TH2 genes. This redistribution of GATA3 is independent of GATA3 DNA binding activity and is instead mediated by the T-bet DNA binding domain, which interacts with the GATA3 DNA binding domain and changes GATA3's sequence binding preference. This mechanism allows T-bet to drive the TH1 gene expression program in the presence of GATA3. We propose that redistribution of one LD-TF by another may be a common mechanism that could explain how specific cell fate choices can be made even in the presence of other transcription factors driving alternative differentiation pathways.

MeSH terms

  • Animals
  • Cell Lineage
  • DNA / metabolism
  • GATA3 Transcription Factor* / genetics
  • GATA3 Transcription Factor* / metabolism
  • Gene Expression
  • Mice
  • T-Box Domain Proteins / genetics
  • T-Box Domain Proteins / metabolism*
  • Th2 Cells* / cytology
  • Th2 Cells* / metabolism

Substances

  • GATA3 Transcription Factor
  • Gata3 protein, mouse
  • T-Box Domain Proteins
  • T-box transcription factor TBX21
  • DNA