Complete genome sequence of Himetobi P strain Sh.Moghaddam, isolated from the Laodelphax striatellus (small brown planthopper)

BMC Res Notes. 2022 Apr 14;15(1):138. doi: 10.1186/s13104-022-06027-x.

Abstract

Objective: Himetobi P virus (HiPV) is an insect virus belonging to the genus Cripavirus in the Dicistroviridae family within the Picornavirales order. Himetobi P strain. Sh.Moghaddam is the first study reported, was isolated from the Laodelphax striatellus (small brown planthopper) of an internal chicken organ in Iran.

Data description: Genomic analysis showed a nucleotide identity of 93.16% with the family Dicistroviridae, genus Triatovirus, and species Himetobi P. The genome assembly comprised 9227 bp, with a 38.8% GC content. Annotation of the genome showed 2 ORF, a total of 2 genes: including 2 coding sequences (CDs) (total) and 8 Miss features. Thus, the whole-genome sequence presented in this study serves as a platform for detecting new genes that may contribute to the pathogenicity of the Himetobi P strain. Sh.Moghaddam.

Keywords: Complete genome sequencing; Himetobi P; Laodelphax striatellus.

MeSH terms

  • Animals
  • Genomics
  • Hemiptera* / genetics
  • High-Throughput Nucleotide Sequencing
  • RNA Viruses*
  • Sequence Analysis, DNA