Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization

Cell Rep. 2022 Apr 12;39(2):110647. doi: 10.1016/j.celrep.2022.110647.

Abstract

Unicellular eukaryotes have been suggested as undergoing self-inflicted destruction. However, molecular details are sparse compared with the mechanisms of programmed/regulated cell death known for human cells and animal models. Here, we report a molecular cell death pathway in Saccharomyces cerevisiae leading to vacuole/lysosome membrane permeabilization. Following a transient cell death stimulus, yeast cells die slowly over several hours, consistent with an ongoing molecular dying process. A genome-wide screen for death-promoting factors identified all subunits of the AP-3 complex, a vesicle trafficking adapter known to transport and install newly synthesized proteins on the vacuole/lysosome membrane. To promote cell death, AP-3 requires its Arf1-GTPase-dependent vesicle trafficking function and the kinase Yck3, which is selectively transported to the vacuole membrane by AP-3. Video microscopy revealed a sequence of events where vacuole permeability precedes the loss of plasma membrane integrity. AP-3-dependent death appears to be conserved in the human pathogenic yeast Cryptococcus neoformans.

Keywords: AP-3; CP: Cell biology; Yck3; cryptococcus; lysosome; programmed cell death; regulated cell death; vacuolar membrane permeabilization; vacuole; vesicle trafficking; yeast.

MeSH terms

  • Casein Kinase I / metabolism
  • Cell Death*
  • Cell Membrane / metabolism
  • DNA-Binding Proteins*
  • Lysosomes / metabolism
  • Saccharomyces cerevisiae Proteins* / metabolism
  • Saccharomyces cerevisiae* / metabolism
  • Transcription Factors*
  • Vacuoles / metabolism

Substances

  • DNA-Binding Proteins
  • Saccharomyces cerevisiae Proteins
  • Transcription Factors
  • enhancer-binding protein AP-3
  • Casein Kinase I
  • YCK3 protein, S cerevisiae