Spacer Domain in Hepatitis B Virus Polymerase: Plugging a Hole or Performing a Role?

J Virol. 2022 May 11;96(9):e0005122. doi: 10.1128/jvi.00051-22. Epub 2022 Apr 12.

Abstract

Hepatitis B virus (HBV) polymerase is divided into terminal protein, spacer, reverse transcriptase, and RNase domains. Spacer has previously been considered dispensable, merely acting as a tether between other domains or providing plasticity to accommodate deletions and mutations. We explore evidence for the role of spacer sequence, structure, and function in HBV evolution and lineage, consider its associations with escape from drugs, vaccines, and immune responses, and review its potential impacts on disease outcomes.

Keywords: HBV; diversity; evolution; genotype; hepatitis B virus; phylogeny; polymerase; polymorphism; spacer.

Publication types

  • Review

MeSH terms

  • Gene Products, pol
  • Genotype
  • Hepatitis B virus* / genetics
  • Mutation
  • Protein Domains
  • RNA-Directed DNA Polymerase* / genetics
  • Viral Proteins* / genetics

Substances

  • Gene Products, pol
  • P protein, Hepatitis B virus
  • Viral Proteins
  • RNA-Directed DNA Polymerase