SH3-domain mutations selectively disrupt Csk homodimerization or PTPN22 binding

Sci Rep. 2022 Apr 7;12(1):5875. doi: 10.1038/s41598-022-09589-9.

Abstract

The kinase Csk is the primary negative regulator of the Src-family kinases (SFKs, e.g., Lck, Fyn, Lyn, Hck, Fgr, Blk, Yes), phosphorylating a tyrosine on the SFK C-terminal tail that mediates autoinhibition. Csk also binds phosphatases, including PTPN12 (PTP-PEST) and immune-cell PTPN22 (LYP/Pep), which dephosphorylate the SFK activation loop to promote autoinhibition. Csk-binding proteins (e.g., CBP/PAG1) oligomerize within membrane microdomains, and high local concentration promotes Csk function. Purified Csk homodimerizes in solution through an interface that overlaps the phosphatase binding footprint. Here we demonstrate that Csk can homodimerize in Jurkat T cells, in competition with PTPN22 binding. We designed SH3-domain mutations in Csk that selectively impair homodimerization (H21I) or PTPN22 binding (K43D) and verified their kinase activity in solution. Disruption of either interaction in cells, however, decreased the negative-regulatory function of Csk. Csk W47A, a substitution previously reported to block PTPN22 binding, had a secondary effect of impairing homodimerization. Csk H21I and K43D will be useful tools for dissecting the protein-specific drivers of autoimmunity mediated by the human polymorphism PTPN22 R620W, which impairs interaction with Csk and with the E3 ubiquitin ligase TRAF3. Future investigations of Csk homodimer activity and phosphatase interactions may reveal new facets of SFK regulation in hematopoietic and non-hematopoietic cells.

MeSH terms

  • Adaptor Proteins, Signal Transducing / metabolism
  • CSK Tyrosine-Protein Kinase / genetics
  • CSK Tyrosine-Protein Kinase / metabolism
  • Humans
  • Membrane Proteins / metabolism
  • Mutation
  • Phosphorylation
  • Protein Tyrosine Phosphatase, Non-Receptor Type 12 / genetics
  • Protein Tyrosine Phosphatase, Non-Receptor Type 12 / metabolism
  • Protein Tyrosine Phosphatase, Non-Receptor Type 22 / genetics
  • Protein Tyrosine Phosphatase, Non-Receptor Type 22 / metabolism
  • src Homology Domains*
  • src-Family Kinases* / metabolism

Substances

  • Adaptor Proteins, Signal Transducing
  • Membrane Proteins
  • PAG1 protein, human
  • CSK Tyrosine-Protein Kinase
  • src-Family Kinases
  • CSK protein, human
  • PTPN12 protein, human
  • PTPN22 protein, human
  • Protein Tyrosine Phosphatase, Non-Receptor Type 12
  • Protein Tyrosine Phosphatase, Non-Receptor Type 22