Identification of SET/EED dual binders as innovative PRC2 inhibitors

Future Med Chem. 2022 May;14(9):609-621. doi: 10.4155/fmc-2022-0010. Epub 2022 Mar 29.

Abstract

Background: The inhibition of PRC2, implicated in the pathogenesis of several tumors, can be a useful therapeutic strategy for cancer treatment. In the literature, two types of PRC2 modulators are reported: competitive inhibitors of S-adenosyl methionine binding to the catalytic subunit EZH2; and allosteric ligands that prevent the interaction of the trimethylated H3K27 lysine in histone 3 to the EED subunit. The lack of dual EZH2/EED modulators drove us to search for compounds capable of recognizing both domains. Materials & methods: This goal was pursued by combining pharmacophore- and docking-based virtual screening of the Multi-Target Ligand Chemotheca database. Prediction tools for absorption, distribution, metabolism and excretion and pan-assay interference compounds were also applied. Results: Finally, five 1,2,3-triazole derivatives were identified as promising dual EZH2/EED modulators. Conclusion: Our multistage screening protocol highlighted the great potential of Chemotheca for identifying polypharmacological agents.

Keywords: EED; PRC2; SET domain; docking; multi-target; pharmacophore; polypharmacology.

MeSH terms

  • Catalytic Domain
  • Histones / metabolism
  • Ligands
  • Neoplasms* / drug therapy
  • Polycomb Repressive Complex 2* / chemistry
  • Polycomb Repressive Complex 2* / metabolism

Substances

  • Histones
  • Ligands
  • Polycomb Repressive Complex 2