Performance of COVIDSeq and Swift Normalase Amplicon SARS-CoV-2 Panels for SARS-CoV-2 Genome Sequencing: Practical Guide and Combining FASTQ Strategy

J Clin Microbiol. 2022 Apr 20;60(4):e0002522. doi: 10.1128/jcm.00025-22. Epub 2022 Mar 24.

Authors

Hosoon Choi¹, Munok Hwang¹, Dhammika H Navarathna², Jing Xu¹, Janell Lukey², Chetan Jinadatha^{3

4}

Affiliations

¹ Department of Research, Central Texas Veterans Health Care Systemgrid.413775.3, Temple, Texas, USA.
² Department of Pathology and Laboratory Medicine Services, Central Texas Veterans Health Care Systemgrid.413775.3, Temple, Texas, USA.
³ Department of Medicine, Central Texas Veterans Health Care Systemgrid.413775.3, Temple, Texas, USA.
⁴ College of Medicine, Texas A&M University, Bryan, Texas, USA.

No abstract available

Keywords: COVID; COVIDSeq; CT value; SARS-CoV-2; clade; lineage; sequencing; swift.

Publication types

Letter
Research Support, Non-U.S. Gov't

MeSH terms

Base Sequence
COVID-19* / diagnosis
Genome, Viral
Humans
RNA, Viral / genetics
SARS-CoV-2* / genetics

Substances

RNA, Viral