Methyl-qPCR: a new method to investigate Epstein-Barr virus infection in post-transplant lymphoproliferative diseases

Clin Epigenetics. 2022 Mar 4;14(1):33. doi: 10.1186/s13148-022-01255-1.

Abstract

Epstein-Barr virus DNA viral load is used as a surrogate marker to start Rituximab in transplant recipients at risk of developing PTLD. However, an elevated EBV DNAemia does not discriminate lymphoproliferation and replication. We designed a new molecular assay (methyl-qPCR) to distinguish methylated versus unmethylated viral genomes. In blood, viral genomes were highly methylated in EBV primary infections, PTLD and 4/5 transplant recipients with high viral load. The only patient with under-methylated EBV genomes did not respond to rituximab. Methyl-qPCR is a convenient method to discriminate between latent and lytic EBV genomes and could be useful in treatment decisions.

Keywords: DNA methylation; Epigenetics; Epstein–Barr virus; Post-transplant lymphoproliferative disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Methylation
  • DNA, Viral / genetics
  • Epstein-Barr Virus Infections* / genetics
  • Herpesvirus 4, Human / genetics
  • Humans
  • Lymphoproliferative Disorders* / etiology
  • Lymphoproliferative Disorders* / genetics
  • Rituximab / therapeutic use

Substances

  • DNA, Viral
  • Rituximab