Dual-function AzuCR RNA modulates carbon metabolism

Proc Natl Acad Sci U S A. 2022 Mar 8;119(10):e2117930119. doi: 10.1073/pnas.2117930119. Epub 2022 Mar 3.

Abstract

SignificanceWhile most small, regulatory RNAs are thought to be "noncoding," a few have been found to also encode a small protein. Here we describe a 164-nucleotide RNA that encodes a 28-amino acid, amphipathic protein, which interacts with aerobic glycerol-3-phosphate dehydrogenase and increases dehydrogenase activity but also base pairs with two mRNAs to reduce expression. The coding and base-pairing sequences overlap, and the two regulatory functions compete.

Keywords: Hfq; ProQ; catabolite repression; glycerol dehdrogenase; sRNA.

MeSH terms

  • Carbon / metabolism*
  • Culture Media
  • Escherichia coli / growth & development
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / chemistry
  • Escherichia coli Proteins / metabolism
  • Galactose / metabolism
  • Glycerol / metabolism
  • Glycerolphosphate Dehydrogenase / metabolism
  • Membrane Proteins / chemistry
  • Membrane Proteins / metabolism
  • Protein Biosynthesis
  • RNA, Bacterial / chemistry
  • RNA, Bacterial / metabolism
  • RNA, Bacterial / physiology*
  • RNA, Messenger / metabolism

Substances

  • Culture Media
  • Escherichia coli Proteins
  • Membrane Proteins
  • RNA, Bacterial
  • RNA, Messenger
  • Carbon
  • Glycerolphosphate Dehydrogenase
  • Glycerol
  • Galactose