Site-Specific Dinitrophenylation of Single-Chain Antibody Fragments for Redirecting a Universal CAR-T Cell against Cancer Antigens

J Mol Biol. 2022 Apr 30;434(8):167513. doi: 10.1016/j.jmb.2022.167513. Epub 2022 Feb 24.

Abstract

We have previously developed a universal chimeric antigen receptor (CAR), which recognizes dinitrophenyl (DNP) and can redirect T and NK cells to target cancer and HIV antigens using DNP-conjugated antibodies as adaptor molecules. However, the DNP-antibody conjugates are generated by random modification, which may not be optimal for this modular system. Here, we report the development of enhanced adaptor molecules by site-specific DNP modification. We use the genetic code expansion technology to generate single-chain fragment variable (scFv) antibodies with site-specific DNP. We compare four anti-CD19 scFv mutants and find that the one with DNP at the flexible peptide linker between VL and VH is the most effective in redirecting anti-DNP CAR-T cells against CD19+ cells. The other three mutants are ineffective in doing so due to reduced DNP exposure or abrogated CD19 binding. We also use the anti-CD22 scFv as another model adaptor molecule and again find that the peptide linker is ideal for DNP derivatization. Our approach can potentially be used to design enhanced adaptor molecules to redirect the DNP-mediated universal CAR against other tumor antigens.

Keywords: DNP; chimeric antigen receptors; genetic code expansion; universal CAR-T cells; unnatural amino acids.

MeSH terms

  • Antigens, CD19 / genetics
  • Antigens, Neoplasm / genetics
  • Antigens, Neoplasm / immunology
  • Cell Line, Tumor
  • Dinitrobenzenes* / chemistry
  • Humans
  • Immunotherapy, Adoptive*
  • Neoplasms* / immunology
  • Neoplasms* / therapy
  • Receptors, Chimeric Antigen* / genetics
  • Receptors, Chimeric Antigen* / immunology
  • Single-Chain Antibodies* / genetics
  • T-Lymphocytes / immunology
  • T-Lymphocytes / transplantation

Substances

  • Antigens, CD19
  • Antigens, Neoplasm
  • Dinitrobenzenes
  • Receptors, Chimeric Antigen
  • Single-Chain Antibodies