Bacterial Genes Encoding Resistance Against Antibiotics and Metals in Well-Maintained Drinking Water Distribution Systems in Finland

Ananda Tiwari; Vicente Gomez-Alvarez; Sallamaari Siponen; Anniina Sarekoski; Anna-Maria Hokajärvi; Ari Kauppinen; Eila Torvinen; Ilkka T Miettinen; Tarja Pitkänen

doi:10.3389/fmicb.2021.803094

Bacterial Genes Encoding Resistance Against Antibiotics and Metals in Well-Maintained Drinking Water Distribution Systems in Finland

Front Microbiol. 2022 Feb 7:12:803094. doi: 10.3389/fmicb.2021.803094. eCollection 2021.

Authors

Affiliations

¹ Expert Microbiology Unit, Finnish Institute for Health and Welfare, Kuopio, Finland.
² Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.
³ Office of Research and Development, U.S. Environmental Protection Agency, Cincinnati, OH, United States.
⁴ Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland.

Abstract

Information on the co-occurrence of antibiotic resistance genes (ARGs) and metal resistance genes (MRGs) among bacterial communities in drinking water distribution systems (DWDSs) is scarce. This study characterized ARGs and MRGs in five well-maintained DWDSs in Finland. The studied DWDSs had different raw water sources and treatment methods. Two of the waterworks employed artificially recharged groundwater (ARGW) and used no disinfection in the treatment process. The other three waterworks (two surface and one groundwater source) used UV light and chlorine during the treatment process. Ten bulk water samples (two from each DWDS) were collected, and environmental DNA was extracted and then sequenced using the Illumina HiSeq platform for high-throughput shotgun metagenome sequencing. A total of 430 ARGs were characterized among all samples with the highest diversity of ARGs identified from samples collected from non-disinfected DWDSs. Furthermore, non-disinfected DWDSs contained the highest diversity of bacterial communities. However, samples from DWDSs using disinfectants contained over double the ratio of ARG reads to 16S rRNA gene reads and most of the MRG (namely mercury and arsenic resistance genes). The total reads and types of ARGs conferring genes associated with antibiotic groups namely multidrug resistance, and bacitracin, beta-lactam, and aminoglycoside and mercury resistance genes increased in waterworks treating surface water with disinfection. The findings of this study contribute toward a comprehensive understanding of ARGs and MRGs in DWDSs. The occurrence of bacteria carrying antibiotic or metal resistance genes in drinking water causes direct exposure to people, and thus, more systematic investigation is needed to decipher the potential effect of these resistomes on human health.

Keywords: antibiotic resistance genes; disinfection; drinking water distribution system; drinking water treatment; mercury resistant gene; metagenomics.