RIF1-ASF1-mediated high-order chromatin structure safeguards genome integrity

Nat Commun. 2022 Feb 17;13(1):957. doi: 10.1038/s41467-022-28588-y.

Abstract

The 53BP1-RIF1 pathway antagonizes resection of DNA broken ends and confers PARP inhibitor sensitivity on BRCA1-mutated tumors. However, it is unclear how this pathway suppresses initiation of resection. Here, we identify ASF1 as a partner of RIF1 via an interacting manner similar to its interactions with histone chaperones CAF-1 and HIRA. ASF1 is recruited to distal chromatin flanking DNA breaks by 53BP1-RIF1 and promotes non-homologous end joining (NHEJ) using its histone chaperone activity. Epistasis analysis shows that ASF1 acts in the same NHEJ pathway as RIF1, but via a parallel pathway with the shieldin complex, which suppresses resection after initiation. Moreover, defects in end resection and homologous recombination (HR) in BRCA1-deficient cells are largely suppressed by ASF1 deficiency. Mechanistically, ASF1 compacts adjacent chromatin by heterochromatinization to protect broken DNA ends from BRCA1-mediated resection. Taken together, our findings identify a RIF1-ASF1 histone chaperone complex that promotes changes in high-order chromatin structure to stimulate the NHEJ pathway for DSB repair.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • BRCA1 Protein / genetics
  • BRCA1 Protein / metabolism
  • Cell Cycle Proteins / genetics
  • Cell Cycle Proteins / metabolism*
  • Cell Line, Tumor
  • Chickens
  • Chromatin / genetics
  • Chromatin / metabolism*
  • DNA End-Joining Repair*
  • Epistasis, Genetic
  • Gene Knockdown Techniques
  • Gene Knockout Techniques
  • HEK293 Cells
  • Humans
  • Molecular Chaperones / genetics
  • Molecular Chaperones / metabolism*
  • Telomere-Binding Proteins / genetics
  • Telomere-Binding Proteins / metabolism*

Substances

  • ASF1A protein, human
  • ASF1B protein, human
  • BRCA1 Protein
  • BRCA1 protein, human
  • Cell Cycle Proteins
  • Chromatin
  • Molecular Chaperones
  • Rif1 protein, human
  • Telomere-Binding Proteins