DNA Methyltransferase 3 (MET3) is regulated by Polycomb group complex during Arabidopsis endosperm development

Plant Reprod. 2022 Jun;35(2):141-151. doi: 10.1007/s00497-021-00436-x. Epub 2022 Jan 28.

Abstract

Complex epigenetic changes occur during plant reproduction. These regulations ensure the proper transmission of epigenetic information as well as allowing for zygotic totipotency. In Arabidopsis, the main DNA methyltransferase is called MET1 and is responsible for methylating cytosine in the CG context. The Arabidopsis genome encodes for three additional reproduction-specific homologs of MET1, namely MET2a, MET2b and MET3. In this paper, we show that the DNA methyltransferase MET3 is expressed in the seed endosperm and its expression is later restricted to the chalazal endosperm. MET3 is biallelically expressed in the endosperm but displays a paternal expression bias. We found that MET3 expression is regulated by the Polycomb complex proteins FIE and MSI1. Seed development is not impaired in met3 mutant, and we could not observe significant transcriptional changes in met3 mutant. MET3 might regulates gene expression in a Polycomb mutant background suggesting a further complexification of the interplay between H3K27me3 and DNA methylation in the seed endosperm. KEY MESSAGE: The DNA METHYLTRANSFERASE MET3 is controlled by Polycomb group complex during endosperm development.

Keywords: Arabidopsis; DNA methylation; Endosperm; MET3; Polycomb.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis Proteins* / genetics
  • Arabidopsis Proteins* / metabolism
  • Arabidopsis*
  • DNA (Cytosine-5-)-Methyltransferases / genetics
  • DNA (Cytosine-5-)-Methyltransferases / metabolism
  • DNA / metabolism
  • DNA Methylation
  • Endosperm / metabolism
  • Gene Expression Regulation, Plant
  • Methyltransferases / genetics
  • Methyltransferases / metabolism
  • Polycomb-Group Proteins / genetics
  • Polycomb-Group Proteins / metabolism
  • Reproduction
  • Seeds / genetics
  • Seeds / metabolism

Substances

  • Arabidopsis Proteins
  • Polycomb-Group Proteins
  • DNA
  • MET1 protein, Arabidopsis
  • Methyltransferases
  • DNA (Cytosine-5-)-Methyltransferases