The emerging roles of NGS in clinical oncology and personalized medicine

Pathol Res Pract. 2022 Feb:230:153760. doi: 10.1016/j.prp.2022.153760. Epub 2022 Jan 10.

Abstract

Next-generation sequencing (NGS) has been increasingly popular in genomics studies over the last decade, as new sequencing technology has been created and improved. Recently, NGS started to be used in clinical oncology to improve cancer therapy through diverse modalities ranging from finding novel and rare cancer mutations, discovering cancer mutation carriers to reaching specific therapeutic approaches known as personalized medicine (PM). PM has the potential to minimize medical expenses by shifting the current traditional medical approach of treating cancer and other diseases to an individualized preventive and predictive approach. Currently, NGS can speed up in the early diagnosis of diseases and discover pharmacogenetic markers that help in personalizing therapies. Despite the tremendous growth in our understanding of genetics, NGS holds the added advantage of providing more comprehensive picture of cancer landscape and uncovering cancer development pathways. In this review, we provided a complete overview of potential NGS applications in scientific and clinical oncology, with a particular emphasis on pharmacogenomics in the direction of precision medicine treatment options.

Keywords: Clinical oncology; Next-generation sequencing (NGS); Personalized medicine (PM); Pharmacogenomics.

Publication types

  • Review

MeSH terms

  • Animals
  • Biomarkers, Tumor / genetics*
  • Clinical Decision-Making
  • Epigenome
  • Epigenomics
  • Gene Expression Profiling
  • Genetic Predisposition to Disease
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Neoplasms / genetics*
  • Neoplasms / pathology
  • Neoplasms / therapy
  • Pharmacogenetics*
  • Phenotype
  • Precision Medicine*
  • Predictive Value of Tests
  • Prognosis
  • Transcriptome

Substances

  • Biomarkers, Tumor