Effects of different short-term tillage managements on rhizosphere soil autotrophic CO2 -fixing bacteria in a double-cropping rice paddy field

Abstract

Soil autotrophic bacteria community plays an important role in carbon (C) cycling process in soil, but there is still limited information about how the rhizosphere soil microbe that drives this process respond to combined application of tillage with crop residue incorporation managements under a double-cropping rice (Oryza sativa L.) paddy field in southern China. Therefore, the 6-years short-term tillage treatment on rhizosphere soil autotrophic bacteria community [RubisCO gene (cbbL)] under the double-cropping rice paddy field in southern China was studied using the high-throughput sequencing method in the present article. The field experiment included four tillage treatments: conventional tillage with crop residue incorporation (CT), rotary tillage with crop residue incorporation (RT), no-tillage with crop residue retention (NT) and rotary tillage with all crop residues removed as a control (RTO). The results showed that abundance, composition and activity of rhizosphere soil cbbL-carrying bacteria were obviously influenced by application of different tillage treatments. The rhizosphere soil abundant cbbL and 16S rRNA genes as well as RubisCO activity with CT, RT and NT treatments were higher than that of RTO treatment. The cbbL sequences in rhizosphere soil with CT, RT and NT treatments mainly included Azoarcus_sp._KH33C, Ralstonia_pickettii, Thermomonospora_curvata, Variovorax_paradoxus and uncultured_proteobacterium. Meanwhile, the results indicated that cbbL-carrying bacterial composition was significantly affected by soil organic carbon, microbial biomass carbon, dissolved organic carbon contents and soil bulk density. There had an obvious difference in characteristics of rhizosphere soil autotrophic bacteria community between CT, RT, NT treatments and RTO treatment. Therefore, it was a beneficial practice for improving rhizosphere soil autotrophic bacteria community in the double-cropping rice paddy field in southern China by combined application of tillage with crop residue incorporation practices.