Insights into the ribosomal trans-translation rescue system: lessons from recent structural studies

FEBS J. 2023 Mar;290(6):1461-1472. doi: 10.1111/febs.16349. Epub 2022 Jan 26.

Abstract

The arrest of protein synthesis caused when ribosomes stall on an mRNA lacking a stop codon is a deadly risk for all cells. In bacteria, this situation is remedied by the trans-translation quality control system. Trans-translation occurs because of the synergistic action of two main partners, transfer-messenger RNA (tmRNA) and small protein B (SmpB). These act in complex to monitor protein synthesis, intervening when necessary to rescue stalled ribosomes. During this process, incomplete nascent peptides are tagged for destruction, problematic mRNAs are degraded and the previously stalled ribosomes are recycled. In this 'Structural Snapshot' article, we describe the mechanism at the molecular level, a view updated after the most recent structural studies using cryo-electron microscopy.

Keywords: SmpB; cryo-EM; ribosome; tmRNA; trans-translation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Codon, Terminator
  • Cryoelectron Microscopy
  • Protein Biosynthesis*
  • RNA, Bacterial / chemistry
  • RNA, Messenger / metabolism
  • Ribosomes* / metabolism

Substances

  • RNA, Bacterial
  • Codon, Terminator
  • RNA, Messenger