USP10 Inhibits Aberrant Cytoplasmic Aggregation of TDP-43 by Promoting Stress Granule Clearance

Mol Cell Biol. 2022 Mar 17;42(3):e0039321. doi: 10.1128/MCB.00393-21. Epub 2022 Jan 10.

Abstract

TAR DNA-binding protein 43 (TDP-43) is a causative factor of amyotrophic lateral sclerosis (ALS). Cytoplasmic TDP-43 aggregates in neurons are a hallmark pathology of ALS. Under various stress conditions, TDP-43 localizes sequentially to two cytoplasmic protein aggregates, namely, stress granules (SGs) first and then aggresomes. Accumulating evidence suggests that delayed clearance of TDP-43-positive SGs is associated with pathological TDP-43 aggregates in ALS. We found that ubiquitin-specific protease 10 (USP10) promotes the clearance of TDP-43-positive SGs in cells treated with proteasome inhibitor, thereby promoting the formation of TDP-43-positive aggresomes, and the depletion of USP10 increases the amount of insoluble TDP-35, a cleaved product of TDP-43, in the cytoplasm. TDP-35 interacted with USP10 in an RNA-binding-dependent manner; however, impaired RNA binding of TDP-35 reduced the localization in SGs and aggresomes and induced USP10-negative TDP-35 aggregates. Immunohistochemistry showed that most of the cytoplasmic TDP-43/TDP-35 aggregates in the neurons of ALS patients were USP10 negative. Our findings suggest that USP10 inhibits aberrant aggregation of TDP-43/TDP-35 in the cytoplasm of neuronal cells by promoting the clearance of TDP-43/TDP-35-positive SGs and facilitating the formation of TDP-43/TDP-35-positive aggresomes.

Keywords: Ras-GAP SH3 domain-binding protein (G3BP); TAR DNA-binding protein 43 (TDP-43); aggresome; amyotrophic lateral sclerosis (ALS); p62; stress granule; ubiquitin-specific protease 10 (USP10).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amyotrophic Lateral Sclerosis* / genetics
  • Cytoplasm / metabolism
  • Cytoplasmic Granules / metabolism
  • DNA-Binding Proteins / metabolism
  • Humans
  • RNA / metabolism
  • Stress Granules
  • Ubiquitin Thiolesterase / metabolism

Substances

  • DNA-Binding Proteins
  • USP10 protein, human
  • RNA
  • Ubiquitin Thiolesterase