Identification and validation of plasma biomarkers for diagnosis of breast cancer in South Asian women

Sci Rep. 2022 Jan 7;12(1):100. doi: 10.1038/s41598-021-04176-w.

Abstract

Breast cancer is the most common malignancy among women globally. Development of a reliable plasma biomarker panel might serve as a non-invasive and cost-effective means for population-based screening of the disease. Transcriptomic profiling of breast tumour, paired normal and apparently normal tissues, followed by validation of the shortlisted genes using TaqMan® Low density arrays and Quantitative real-time PCR was performed in South Asian women. Fifteen candidate protein markers and 3 candidate epigenetic markers were validated first in primary breast tumours and then in plasma samples of cases [N = 202 invasive, 16 DCIS] and controls [N = 203 healthy, 37 benign] using antibody array and methylation specific PCR. Diagnostic efficiency of single and combined markers was assessed. Combination of 6 protein markers (Adipsin, Leptin, Syndecan-1, Basic fibroblast growth factor, Interleukin 17B and Dickopff-3) resulted in 65% sensitivity and 80% specificity in detecting breast cancer. Multivariate diagnostic analysis of methylation status of SOSTDC1, DACT2, WIF1 showed 100% sensitivity and up to 91% specificity in discriminating BC from benign and controls. Hence, combination of SOSTDC1, DACT2 and WIF1 was effective in differentiating breast cancer [non-invasive and invasive] from benign diseases of the breast and healthy individuals and could help as a complementary diagnostic tool for breast cancer.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • Adaptor Proteins, Signal Transducing / blood
  • Adaptor Proteins, Signal Transducing / genetics
  • Adult
  • Asian People / genetics
  • Biomarkers, Tumor / blood
  • Biomarkers, Tumor / genetics*
  • Breast Neoplasms / blood
  • Breast Neoplasms / diagnosis*
  • Breast Neoplasms / ethnology
  • Breast Neoplasms / genetics
  • Case-Control Studies
  • DNA Methylation
  • Epigenesis, Genetic
  • Female
  • Gene Expression Profiling*
  • Humans
  • India
  • MCF-7 Cells
  • Middle Aged
  • Oligonucleotide Array Sequence Analysis
  • Predictive Value of Tests
  • Real-Time Polymerase Chain Reaction
  • Reproducibility of Results
  • Transcriptome

Substances

  • Adaptor Proteins, Signal Transducing
  • Biomarkers, Tumor
  • DACT2 protein, human
  • SOSTDC1 protein, human
  • WIF1 protein, human