A Multiplexed Cell-Free Assay to Screen for Antimicrobial Peptides in Double Emulsion Droplets

Angew Chem Int Ed Engl. 2022 Mar 21;61(13):e202114632. doi: 10.1002/anie.202114632. Epub 2022 Feb 9.

Abstract

The global surge in bacterial resistance against traditional antibiotics triggered intensive research for novel compounds, with antimicrobial peptides (AMPs) identified as a promising candidate. Automated methods to systematically generate and screen AMPs according to their membrane preference, however, are still lacking. We introduce a novel microfluidic system for the simultaneous cell-free production and screening of AMPs for their membrane specificity. On our device, AMPs are cell-free produced within water-in-oil-in-water double emulsion droplets, generated at high frequency. Within each droplet, the peptides can interact with different classes of co-encapsulated liposomes, generating a membrane-specific fluorescent signal. The double emulsions can be incubated and observed in a hydrodynamic trapping array or analyzed via flow cytometry. Our approach provides a valuable tool for the discovery and development of membrane-active antimicrobials.

Keywords: Analytical Methods; Antimicrobial Peptides; Cell-Free Protein Synthesis; Droplet Microfluidics; Membranes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antimicrobial Peptides*
  • Emulsions / chemistry
  • Flow Cytometry / methods
  • Microfluidics* / methods
  • Water / chemistry

Substances

  • Antimicrobial Peptides
  • Emulsions
  • Water