RplI interacts with 5' UTR of exsA to repress its translation and type III secretion system in Pseudomonas aeruginosa

PLoS Pathog. 2022 Jan 5;18(1):e1010170. doi: 10.1371/journal.ppat.1010170. eCollection 2022 Jan.

Abstract

Pseudomonas aeruginosa is an important opportunistic pathogen capable of causing variety of infections in humans. The type III secretion system (T3SS) is a critical virulence determinant of P. aeruginosa in the host infections. Expression of the T3SS is regulated by ExsA, a master regulator that activates the expression of all known T3SS genes. Expression of the exsA gene is controlled at both transcriptional and posttranscriptional levels. Here, we screened a P. aeruginosa transposon (Tn5) insertional mutant library and found rplI, a gene coding for the ribosomal large subunit protein L9, to be a repressor for the T3SS gene expression. Combining real-time quantitative PCR (qPCR), western blotting and lacZ fusion assays, we show that RplI controls the expression of exsA at the posttranscriptional level. Further genetic experiments demonstrated that RplI mediated control of the exsA translation involves 5' untranslated region (5' UTR). A ribosome immunoprecipitation assay and qPCR revealed higher amounts of a 24 nt fragment from exsA mRNA being associated with ribosomes in the ΔrplI mutant. An interaction between RplI and exsA mRNA harboring its 24 nt, but not 12 nt, 5' UTR was confirmed by RNA Gel Mobility Shift and Microscale Thermophoresis assays. Overall, this study identifies the ribosomal large subunit protein L9 as a novel T3SS repressor that inhibits ExsA translation in P. aeruginosa.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Bacterial Proteins / metabolism*
  • Gene Expression Regulation, Bacterial / physiology*
  • HeLa Cells
  • Humans
  • Pseudomonas aeruginosa / metabolism
  • Pseudomonas aeruginosa / pathogenicity*
  • Ribosomal Proteins / metabolism*
  • Trans-Activators / metabolism*
  • Transcription, Genetic
  • Type III Secretion Systems / metabolism*
  • Virulence / physiology
  • Virulence Factors / metabolism

Substances

  • 5' Untranslated Regions
  • Bacterial Proteins
  • ExsA protein, Pseudomonas aeruginosa
  • Ribosomal Proteins
  • Trans-Activators
  • Type III Secretion Systems
  • Virulence Factors
  • ribosomal protein L9

Grants and funding

This research was supported by the National Science Foundation of China (31970680, 31870130 and 82061148018 to FB, 32170177 to WW, 31970179 and 32170199 to ZC), National Key Research and Development Project of China (2017YFE0125600, 2021YFE0201300 to FB, 2021YFE0101700 to WW). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.