Ku80 is involved in telomere maintenance but dispensable for genomic stability in Leishmania mexicana

PLoS Negl Trop Dis. 2021 Dec 29;15(12):e0010041. doi: 10.1371/journal.pntd.0010041. eCollection 2021 Dec.

Abstract

Background: Telomeres are indispensable for genome stability maintenance. They are maintained by the telomere-associated protein complex, which include Ku proteins and a telomerase among others. Here, we investigated a role of Ku80 in Leishmania mexicana. Leishmania is a genus of parasitic protists of the family Trypanosomatidae causing a vector-born disease called leishmaniasis.

Methodology/principal findings: We used the previously established CRISPR/Cas9 system to mediate ablation of Ku80- and Ku70-encoding genes in L. mexicana. Complete knock-outs of both genes were confirmed by Southern blotting, whole-genome Illumina sequencing, and RT-qPCR. Resulting telomeric phenotypes were subsequently investigated using Southern blotting detection of terminal restriction fragments. The genome integrity in the Ku80- deficient cells was further investigated by whole-genome sequencing. Our work revealed that telomeres in the ΔKu80 L. mexicana are elongated compared to those of the wild type. This is a surprising finding considering that in another model trypanosomatid, Trypanosoma brucei, they are shortened upon ablation of the same gene. A telomere elongation phenotype has been documented in other species and associated with a presence of telomerase-independent alternative telomere lengthening pathway. Our results also showed that Ku80 appears to be not involved in genome stability maintenance in L. mexicana.

Conclusion/significance: Ablation of the Ku proteins in L. mexicana triggers telomere elongation, but does not have an adverse impact on genome integrity.

MeSH terms

  • Genome, Protozoan
  • Genomic Instability*
  • Humans
  • Ku Autoantigen / genetics
  • Ku Autoantigen / metabolism*
  • Leishmania mexicana / genetics*
  • Leishmania mexicana / metabolism*
  • Leishmaniasis, Cutaneous / parasitology
  • Protozoan Proteins / genetics
  • Protozoan Proteins / metabolism*
  • Telomere / genetics
  • Telomere / metabolism*
  • Trypanosoma brucei brucei / genetics
  • Trypanosoma brucei brucei / metabolism

Substances

  • Protozoan Proteins
  • Ku Autoantigen

Grants and funding

This work was supported by the European Regional Funds (project "Centre for Research of Pathogenicity and Virulence of Parasites" CZ.02.1.01/16_019/0000759) to VY, EP, and ATSA, the grant SGS/PrF/2021 from the University of Ostrava to EP, AZ, and ATSA, Moravskoslezský kraj research initiative grant RRC/02/2020 and RRC/10/2019 to ATSA and AZ, respectively, and a grant 0493/ZM1822/8 from the City of Ostrava to EP. A part of this work on telomere analyses in Leishmania mexicana ΔKu80 and ΔKu70 was funded by the Russian Science Foundation (grant 19-15-00054) to VY and ESG. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.