Semi-rational Engineering of a Promiscuous Fatty Acid Hydratase for Alteration of Regioselectivity

Chembiochem. 2022 Feb 16;23(4):e202100606. doi: 10.1002/cbic.202100606. Epub 2021 Dec 30.

Abstract

Fatty acid hydratases (FAHs) catalyze regio- and stereo-selective hydration of unsaturated fatty acids to produce hydroxy fatty acids. Fatty acid hydratase-1 (FA-HY1) from Lactobacillus Acidophilus is the most promiscuous and regiodiverse FAH identified so far. Here, we engineered binding site residues of FA-HY1 (S393, S395, S218 and P380) by semi-rational protein engineering to alter regioselectivity. Although it was not possible to obtain a completely new type of regioselectivity with our mutant libraries, a significant shift of regioselectivity was observed towards cis-5, cis-8, cis-11, cis-14, cis-17-eicosapentaenoic acid (EPA). We identified mutants (S393/S395 mutants) with excellent regioselectivity, generating a single hydroxy fatty acid product from EPA (15-OH product), which is advantageous from application perspective. This result is impressive given that wild-type FA-HY1 produces a mixture of 12-OH and 15-OH products at 63 : 37 ratio (12-OH : 15-OH). Moreover, our results indicate that native FA-HY1 is at its limit in terms of promiscuity and regiospecificity, thus it may not be possible to diversify its product portfolio with active site engineering. This behavior of FA-HY1 is unlike its orthologue, fatty acid hydratase-2 (FA-HY2; 58 % sequence identity to FA-HY1), which has been shown earlier to exhibit significant promiscuity and regioselectivity changes by a few active site mutations. Our reverse engineering from FA-HY1 to FA-HY2 further demonstrates this conclusion.

Keywords: Biocatalysis; enzyme engineering; fatty acid hydratases; hydroxy fatty acids; regioselectivity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Fatty Acids / biosynthesis*
  • Fatty Acids / chemistry
  • Hydrolases / genetics
  • Hydrolases / metabolism*
  • Lactobacillus acidophilus / enzymology
  • Models, Molecular
  • Molecular Structure
  • Mutation
  • Protein Engineering*
  • Stereoisomerism

Substances

  • Fatty Acids
  • Hydrolases