Hobit confers tissue-dependent programs to type 1 innate lymphoid cells

Proc Natl Acad Sci U S A. 2021 Dec 14;118(50):e2117965118. doi: 10.1073/pnas.2117965118.

Abstract

Identification of type 1 innate lymphoid cells (ILC1s) has been problematic. The transcription factor Hobit encoded by Zfp683 has been proposed as a major driver of ILC1 programs. Using Zfp683 reporter mice, we showed that correlation of Hobit expression with ILC1s is tissue- and context-dependent. In liver and intestinal mucosa, Zfp683 expression correlated well with ILC1s; in salivary glands, Zfp683 was coexpressed with the natural killer (NK) master transcription factors Eomes and TCF1 in a unique cell population, which we call ILC1-like NK cells; during viral infection, Zfp683 was induced in conventional NK cells of spleen and liver. The impact of Zfp683 deletion on ILC1s and NK cells was also multifaceted, including a marked decrease in granzyme- and interferon-gamma (IFNγ)-producing ILC1s in the liver, slightly fewer ILC1s and more Eomes+ TCF1+ ILC1-like NK cells in salivary glands, and only reduced production of granzyme B by ILC1 in the intestinal mucosa. NK cell-mediated control of viral infection was unaffected. We conclude that Hobit has two major impacts on ILC1s: It sustains liver ILC1 numbers, while promoting ILC1 functional maturation in other tissues by controlling TCF1, Eomes, and granzyme expression.

Keywords: Eomes; Hobit; innate lymphoid cells; liver; natural killer cells.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigens, CD
  • Biomarkers
  • Gene Deletion
  • Gene Expression Regulation / physiology
  • Granzymes / genetics
  • Granzymes / metabolism
  • Immunity, Cellular / physiology*
  • Immunity, Innate / physiology*
  • Interferon-gamma / genetics
  • Interferon-gamma / metabolism
  • Liver / metabolism
  • Lymphocyte Subsets / classification*
  • Lymphocyte Subsets / physiology*
  • Membrane Proteins / genetics
  • Mice
  • RNA, Small Cytoplasmic / genetics
  • RNA, Small Cytoplasmic / metabolism
  • RNA-Seq
  • T-Box Domain Proteins / genetics
  • T-Box Domain Proteins / metabolism*
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*

Substances

  • Antigens, CD
  • Biomarkers
  • Eomes protein, mouse
  • Membrane Proteins
  • RNA, Small Cytoplasmic
  • T-Box Domain Proteins
  • Transcription Factors
  • Zfp683 protein, mouse
  • Interferon-gamma
  • Granzymes
  • Gzmb protein, mouse
  • granzyme A, mouse