Integrative Bioinformatics Analysis Reveals That Infarct-Mediated Overexpression of Potential miR-662/CREB1 Pathway-Induced Neuropeptide VIP Is Associated with the Risk of Atrial Fibrillation: A Correlation Analysis between Myocardial Electrophysiology and Neuroendocrine

Dis Markers. 2021 Nov 22:2021:8116633. doi: 10.1155/2021/8116633. eCollection 2021.

Abstract

Background: Neuropeptide levels are closely associated with the development and maintenance of atrial fibrillation (AF) after myocardial infarction (MI). This study was aimed at investigating the regulatory network that affects neuropeptide expression through transcription factor modulation.

Methods: We downloaded three datasets from the GEO database, and after performing differential and crosstabulation analyses, we screened out differentially expressed (DE) miRNAs and DEmRNAs coexpressed in AF and MI and performed DEmiRNA-DEmRNA pairing prediction; from which, we constructed a regulatory network. Subsequently, the hsa-miR-662-CREB1-VIP axis was obtained, and the role of CREB1 and VIP in the development of AF after MI was further revealed by single-cell analysis and prediction model construction.

Results: In this study, eight DEmRNAs and four miRNAs were screened. hsa-miR-662 was identified by database integration analysis to regulate the transcription factor CREB1, a potential transcriptional regulator in VIP. CREB1 and VIP are mainly enriched in pathways of energy metabolism, ion channels, and myocardial contraction. CREB1 and VIP were identified as biomarkers of the onset and prognosis of MI and AF.

Conclusions: In this study, the miR-662/CREB1/VIP regulatory pathway was constructed through integrated analysis of datasets, thus providing new ideas to study the mechanisms of AF development.

MeSH terms

  • Aged
  • Atrial Fibrillation / etiology
  • Atrial Fibrillation / metabolism
  • Atrial Fibrillation / pathology*
  • Biomarkers / analysis
  • Case-Control Studies
  • Computational Biology / methods*
  • Cyclic AMP Response Element-Binding Protein / genetics
  • Cyclic AMP Response Element-Binding Protein / metabolism*
  • Electrophysiology
  • Female
  • Follow-Up Studies
  • Gene Expression Regulation*
  • Humans
  • Infarction / complications*
  • Male
  • MicroRNAs / genetics*
  • Prognosis
  • Vasoactive Intestinal Peptide / metabolism*

Substances

  • Biomarkers
  • CREB1 protein, human
  • Cyclic AMP Response Element-Binding Protein
  • MicroRNAs
  • Vasoactive Intestinal Peptide