VEGF Family Gene Expression as Prognostic Biomarkers for Alzheimer's Disease and Primary Liver Cancer

Comput Math Methods Med. 2021 Nov 20:2021:3422393. doi: 10.1155/2021/3422393. eCollection 2021.

Abstract

Background: To analyze the expression of vascular endothelial growth factor (VEGF) in hepatocellular carcinoma (HCC) and cognitive impairment, explore the relationship between the expression of VEGF family genes and prognosis of patients with HCC, and evaluate the predictive ability of VEGF in cognitive impairment using computerized methods.

Methods: VEGF expression in liver cancer tissues and normal tissues was analyzed using bioinformatics methods. The Kaplan-Meier survival analysis method was also used to analyze the relationship between VEGF expression and the prognosis of patients with HCC. Furthermore, immune infiltration assessment and gene set enrichment analysis were performed. Meanwhile, the differential expression of VEGF family genes between patients with Alzheimer's disease (AD) and healthy controls was also checked.

Results: Based on The Cancer Genome Atlas (TCGA) database, the VEGF family genes (VEFGA, VEGFB, VEGFC, and VEGFD) were highly expressed in cancer tissues and were significantly associated with poor prognosis in HCC. In HCC, the VEGF family genes showed significant heterogeneity in their functional and immune infiltration characteristics. Finally, VEGF family genes were identified as prognostic biomarkers in AD and risk prediction markers in HCC.

Conclusions: VEGF is highly expressed in patients with HCC and lowly expressed in patients with AD. VEGF has opposite opposing roles in the treatment of tumors and cognitive impairment.

Publication types

  • Retracted Publication

MeSH terms

  • Alzheimer Disease / genetics*
  • Biomarkers, Tumor / genetics
  • Carcinoma, Hepatocellular / genetics*
  • Case-Control Studies
  • Computational Biology
  • Databases, Genetic
  • Gene Expression
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic
  • Genetic Markers
  • Humans
  • Kaplan-Meier Estimate
  • Liver Neoplasms / genetics*
  • Prognosis
  • Risk Factors
  • Vascular Endothelial Growth Factor A / genetics*
  • Vascular Endothelial Growth Factor B / genetics
  • Vascular Endothelial Growth Factor C / genetics
  • Vascular Endothelial Growth Factor D / genetics
  • Vascular Endothelial Growth Factors / genetics*

Substances

  • Biomarkers, Tumor
  • Genetic Markers
  • VEGFA protein, human
  • VEGFB protein, human
  • VEGFC protein, human
  • VEGFD protein, human
  • Vascular Endothelial Growth Factor A
  • Vascular Endothelial Growth Factor B
  • Vascular Endothelial Growth Factor C
  • Vascular Endothelial Growth Factor D
  • Vascular Endothelial Growth Factors