Conformations and structures of 1,4-pentadien-3-ol and its water complex characterized by rotational spectroscopy

Spectrochim Acta A Mol Biomol Spectrosc. 2022 Feb 15;267(Pt 2):120589. doi: 10.1016/j.saa.2021.120589. Epub 2021 Nov 16.

Abstract

The 1,4-pentadien-3-ol and its monohydrate have been characterized by microwave spectroscopy in combination with theoretical computations. Experiments and ab initio calculations revealed that the 1,4-pentadien-3-ol monomer prefers a configuration with one vinyl being syn to the hydroxyl oxygen and the hydroxyl hydrogen toward the skew arranged vinyl, which therefore makes possible simultaneous CH···O and OH···π interactions. The observed monohydrate corresponds to the global minimum predicted theoretically, which is stabilized through a primary OH···Ow hydrogen bond together with a much weaker OwH···π hydrogen bond. The NCI analyses, NBO calculation and SAPT method were applied to further elucidate the characteristics of hydrogen bonds in the 1,4-pentadien-3-ol···water complex.

Keywords: Ab-initio calculations; Conformational analysis; Hydrogen bond; Microwave spectroscopy; Transient chirality.

MeSH terms

  • Hydrogen Bonding
  • Molecular Conformation
  • Quantum Theory*
  • Spectrum Analysis
  • Water*

Substances

  • Water