Associations between Genetic Variants in the Vitamin D Metabolism Pathway and Severity of COVID-19 among UAE Residents

Nutrients. 2021 Oct 20;13(11):3680. doi: 10.3390/nu13113680.

Abstract

Vitamin D has many effects on cells in the immune system. Many studies have linked low vitamin D status with severity of COVID-19. Genetic variants involved in vitamin D metabolism have been implicated as potential risk factors for severe COVID-19 outcomes. This study investigated how genetic variations in humans affected the clinical presentation of COVID-19. In total, 646 patients with SARS-CoV-2 infection were divided into two groups: noncritical COVID-19 (n = 453; 70.12%) and a critical group (n = 193; 29.87%). Genotype data on the GC, NADSYN1, VDR, and CYP2R1 genes along with data on serum 25-hydroxyvitamin D levels were compiled in patients admitted to a major hospital in the United Arab Emirates between April 2020 and January 2021. We identified 12 single-nucleotide polymorphisms associated with the critical COVID-19 condition: rs59241277, rs113574864, rs182901986, rs60349934, and rs113876500; rs4944076, rs4944997, rs4944998, rs4944979, and rs10898210; and rs11574018 and rs11574024. We report significant associations between genetic determinants of vitamin D metabolism and COVID-19 severity in the UAE population. Further research needed to clarify the mechanism of action against viral infection in vitamin D deficiency. These variants could be used with vaccination to manage the spread of SARS-CoV-2 and could be particularly valuable in populations in which vitamin D deficiency is common.

Keywords: COVID-19; UAE; genotypes; metabolism; polymorphism; vitamin D.

MeSH terms

  • Adult
  • Biomarkers / blood
  • COVID-19 / blood
  • COVID-19 / diagnosis
  • COVID-19 / genetics*
  • Carbon-Nitrogen Ligases with Glutamine as Amide-N-Donor / genetics*
  • Carbon-Nitrogen Ligases with Glutamine as Amide-N-Donor / metabolism
  • Cholestanetriol 26-Monooxygenase / genetics*
  • Cholestanetriol 26-Monooxygenase / metabolism
  • Cytochrome P450 Family 2 / genetics*
  • Cytochrome P450 Family 2 / metabolism
  • Female
  • Humans
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • Receptors, Calcitriol / genetics*
  • Receptors, Calcitriol / metabolism
  • Severity of Illness Index
  • United Arab Emirates
  • Vitamin D / analogs & derivatives*
  • Vitamin D / blood

Substances

  • Biomarkers
  • Receptors, Calcitriol
  • VDR protein, human
  • Vitamin D
  • 25-hydroxyvitamin D
  • Cytochrome P450 Family 2
  • CYP2R1 protein, human
  • Cholestanetriol 26-Monooxygenase
  • Carbon-Nitrogen Ligases with Glutamine as Amide-N-Donor
  • NADSYN1 protein, human